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DNATUBE VIDEOS
X Inactivation
This animation shows how the random deactivation of one of the X chromosomes in a pair can lead to a mozaicism in the expression genes. Includes audio narration.

Inactivation 
Added: 520 days ago by benchwork Views: 782 Comments: 0
FEATURED VIDEOS
Translational Medicine
Added:152 days agoby ascriabine
Muscle contraction
Added:282 days agoby mnazirokur
Bacteriophage T4
Added:383 days agoby seyet
Full VEGF & Angiogenesis Video
Added:398 days agoby asteri
Cancer Metastasis: CXCR4
Added:422 days agoby benchwork
Gene Expression Lodish et al 2000
Added:428 days agoby watchme

3D structure of chromosome
1:46
This video shows the packaging of DNA in the nucleus.
3D  struct  of  nuc  chroms 
Added: 656 days ago by benchwork Views: 10539 Comments: 0
      (4 ratings)

Visualization of tRNA Movements on 70S Ribosome
0:56
ribosome ratchet
07.9-ribosome_ratchet 
Added: 664 days ago by mnazirokur Views: 5840 Comments: 0
      (1 ratings)

Human Genome Project - Mapping
0:0
all This video shows how the mapping done in human genome project. More info : Completed in 2003, the Human Genome Project (HGP) was a 13-year project coordinated by the U.S. Department of Energy and the National Institutes of Health. During the early years of the HGP, the Wellcome Trust (U.K.) became a major partner; additional contributions came from Japan, France, Germany, China, and others. See our history page for more information. Project goals were to identify all the approximately 20,000-25,000 genes in human DNA, determine the sequences of the 3 billion chemical base pairs that make up human DNA, store this information in databases, improve tools for data analysis, transfer related technologies to the private sector, and address the ethical, legal, and social issues (ELSI) that may arise from the project.
mapping 
Added: 661 days ago by siere Views: 4344 Comments: 0
      (1 ratings)

Glycolysis pathway - Enzyme match up
0:0
all In this flash animation, you can test your glycolysis pathway knowledge.
Glycolysispathway 
Added: 661 days ago by siere Views: 6566 Comments: 0
      (2 ratings)

Development of egg cells
1:27
This video show the development of egg cells. In animals, one can usually distinguish 4 stages of embryonic development. 1.Cleavage 2.Patterning 3.Differentiation 4.Grow ClEAVAGE Mitosis and cytokinesis of the zygote, an unusually large cell, produces an increasing number of smaller cells, each with an exact copy of the genome present in the zygote. However, the genes of the zygote are not expressed at first. The activities of cleavage are controlled by the mother\'s genome; that is, by mRNAs and proteins she deposited in the unfertilized egg. Cleavage ends with the formation of a blastula. PATTERNING During this phase, the cells produced by cleavage organize themselves in layers and masses, a process called gastrulation. The pattern of the future animal appears: front and rear (the anterior-posterior axis) back side and belly side (its dorsal-ventral axis)left and right sides. There is little visible differentiation of the cells in the various layers, but probes for cell-specific proteins reveal that different groups of cells have already started on specific paths of future development. Ref: http://users.rcn.com/jkimball.ma.ultranet/BiologyPages/E/EmbryonicDevelopment.html
development  egg  cell  cleavage   
Added: 660 days ago by mnazirokur Views: 7472 Comments: 0
      (1 ratings)

Usage of PDB file in analysing 3D structure of proteins
2:50
About PDB file: This is a short guide to the manipulation of the files of the Protein Data Bank (PDB) [1]. There are several issues which are related to the format of these files and to the data they contain which are not always easy to understand without some experience. The idea here is to give some hints and guidelines on what to expect from these files whether they come from the PDB or were generated by a program, and how to write software which manipulates these data.
PDB  file    3D  structure 
Added: 653 days ago by benchwork Views: 2765 Comments: 0
      (1 ratings)

Stem Cells Part III
2:18
Stem Cells Stem cells serve as the source of all the other specialized cells in the body, both when it forms during embryogenesis and when it replaces cells that have been lost to aging, injury or disease. These videos are created by RIKEN CDB and they explain the different types of stem cell found in the embryonic body and the adult and illustrate the roles of these "master cells" in development and regeneration. Video REff: http://www.cdb.riken.go.jp I also uploaded other 3 parts. Search " stem cells" on DnaTube and most probably you will find other videos.
stemcell 
Added: 645 days ago by siere Views: 4560 Comments: 0
      (3 ratings)

Nuclear Receptor signalling
0:0
all You can find any information throught this animation about Nuclear Receptor signaling. REf: http://www.nursa.org
NuclearReceptor 
Added: 652 days ago by benchwork Views: 3765 Comments: 1
      (1 ratings)

Dynamic instability of microtubules ( under microscope )
0:32
Video shows growth and shrinkage of microtubules. More info about dynamic instability of microtubules: Microtubules may grow steadily, and then shrink rapidly by loss of tubulin dimers at the plus end. The rapid disassembly is referred to as catastrophe. In vitro, the tendency to grow or shrink may be a function of tubulin concentration. As microtubules grow, tubulin dimers are depleted. Below a critical tubulin concentration, rapid shrinkage at the plus end has been attributed to loss of a "GTP cap." Hydrolysis of GTP by b-tubulin, as polymerization brings it into contact with a-tubulin, takes time. A rapidly growing microtubule may accumulate a few layers of tubulin-GTP at the plus end. A GTP cap stabilizes the plus end of a microtubule. If the concentration of tubulin heterodimers is low, dissociation of tubulin-GTP may expose tubulin-GDP at the plus end, causing that end to become unstable. Rapid shrinkage ensues. Fraying or curving of protofilaments is observed at the ends of rapidly disassembling microtubules. This may be due to a change in conformation when b-subunits at the plus end have bound GDP instead of GTP. Tubulin heterodimers with GDP bound to the b subunit form ring shaped assemblies in vitro. Straight protofilaments form only when both tubulins have bound GTP. Dynamic instability of microtubules in vivo is regulated by interaction with other proteins. For example, during prophase of mitosis, microtubules grow out from the centrosome. If the plus end of a microtubule makes contact with a chromosome, it becomes stabilized. Otherwise rapid disassembly at the plus end ensues, and the tubulin dimers are available for growth of another microtubule. Text Ref: http://www.rpi.edu/dept/bcbp/molbiochem/MBWeb/mb2/part1/microtub.htm
dynamic  instability    microtubule 
Added: 648 days ago by mnazirokur Views: 3810 Comments: 0
      (1 ratings)

introduction to metabolism
0:0
all this interactive animation helps you to understand the metabolism in the cell.
metabolism 
Added: 646 days ago by tubeman Views: 4122 Comments: 1
      (1 ratings)

Signal Recognition Particle
1:24
This Maya animation depicts the process by which the translating ribosome is halted by the signal recognition particle (SRP). The ribosome is subsequently brought to the membrane and docked with a channel to translocate the nascent polypeptide chain. video by Eric Keller, Steve Davy / Stylus Visuals
srp 
Added: 367 days ago by sertan Views: 25514 Comments: 0
( Not yet rated )

Reovirus Life Cycle
3:12
a more in-depth look at the reovirus life cycle. This current version highlights each of the 8 proteins that make up the virus as well as its icosahedral symmetry. The virus is activated upon chymotrypsin 'attack' and cleavage of the outer protein layer. The virus then binds to and enters the cell via the JAM-1 receptor and clathrin-mediated endocytosis. video by Gael McGill, Janet Iwasa
reovirus 
Added: 367 days ago by sertan Views: 19060 Comments: 0
( Not yet rated )

Muscle Contraction
0:42
A muscle contraction (also known as a muscle twitch or simply twitch) occurs when a muscle fiber generates tension through the action of actin and myosin cross-bridge cycling. While under tension, the muscle may lengthen, shorten or remain the same. Though the term 'contraction' implies a shortening or reduction, when used as a scientific term referring to the muscular system contraction refers to the generation of tension by muscle fibers with the help of motor neurons. Locomotion in most higher only through the repeated contraction of many muscles at the correct times. Contraction is controlled by the central nervous system (CNS), which comprises the brain and spinal cord. Voluntary muscle contractions are initiated in the brain, while the spinal cord initiates involuntary reflexes.
contraction 
Added: 282 days ago by mnazirokur Views: 17100 Comments: 0
( Not yet rated )

Activated T Cells attacking on cancer cells.
0:39
t cell This video shows activated T cell which are shiny blue and attacting on the cancer cells and kill them. Video REf: http://www.hybridmedicalanimation.com
ppar       
Added: 637 days ago by benchwork Views: 13891 Comments: 1
      (3 ratings)

Bacterial Conjugation
0:14
Conjugation Antibiotic resistance genes can be shared between bacteria through a sex pilus. Video Ref: www.learner.org Video Reff: www.learner.org Bacterial Conjugation text info: Bacterial conjugation is the transfer of genetic material between bacteria through direct cell-to-cell contact. Discovered in 1946 by Joshua Lederberg and Edward Tatum, conjugation is a mechanism of horizontal gene transfer as are transformation and transductionalthough these mechanisms do not involve cell-to-cell contact. text reff: wikipedia
Bacterial  Conjugation   
Added: 641 days ago by sana Views: 12959 Comments: 0
( Not yet rated )

ATP synthase structure and mechanism
3:19
ATP synthase An ATP synthase is a general term for an enzyme that can synthesize adenosine triphosphate (ATP) from adenosine diphosphate (ADP) and inorganic phosphate by utilizing some form of energy. The overall reaction sequence is: ADP + Pi → ATP Molecular model of ATP synthase by X-ray diffraction method ATP synthase in E. coliThese enzymes are of crucial importance in almost all organisms, because ATP is the common "energy currency" of cells. In mitochondria, the F1FO ATP synthase has a long history of scientific study. The F1 portion of the ATP synthase is above the membrane, the FO portion is within the membrane. It's easy to visualize the FOF1 particle as resembling the fruiting body of a common mushroom, with the head being the F1 particle, the stalk being the gamma subunit of F1, and the base and "roots" being the FO particle embedded in the membrane. The F1 particle was first isolated by Ephraim Racker in 1961. The nomenclature of the enzyme suffers from a long history. The F1 fraction derives it name from the term "Fraction 1" and FO (written as a subscript "O", not "zero") derives it name from being the oligomycine binding fraction. Taking as an example the nomenclature of subunits in the bovine enzyme, many subunits have Greek and Roman alphabet names (alpha, beta, gamma, delta, epsilon and a, b, c, d, e, f, g, h), while others have more complex names such as F6 (from "Fraction 6"), OSCP (the oligomycin sensitivity conferral protein), A6L (named for the gene that codes for it in the mitochondrial genome) and IF1 (inhibitory factor 1). The F1 particle is large and can be seen in the transmission electron microscope by negative staining (1962, Fernandez-Moran et al., Journal of Molecular Biology, Vol 22, p 63). These are particles of 9 nm diameter that pepper the inner mitochondrial membrane. They were originally called elementary particles and were thought to contain the entire respiratory apparatus of the mitochondrion, but through a long series of experiments, Ephraim Racker and his colleagues were able to show that this particle is correlated with ATPase activity in uncoupled mitochondria and with the ATPase activity in submitochondrial particles created by exposing mitochondria to ultrasound. This ATPase activity was further associated with the creation of ATP by yet another long series of experiments in many laboratories. The antibiotic oligomycin inhibits ATP synthase. Text Reff: http://en.wikipedia.org/wiki/ATP_synthase
atpsynthase 
Added: 650 days ago by benchwork Views: 11918 Comments: 1
     (6 ratings)

DNA - acridine complex structure
1:5
DNA fragment complexed with acridine derivative (a carcinogenic dye). Data source: Protein Data Bank code 2GB9. Wiki text info: Acridine, C13H9N, is an organic compound and a nitrogen heterocycle. Acridine is also used to describe compounds containing the C13N tricycle. Acridine is structurally related to anthracene with one of the central CH groups is replaced by nitrogen. Acridine, a colorless solid, was first isolated from coal tar. It is a raw material used for the production of dyes and some valuable drugs. Many acridines also have antiseptic properties such as Proflavine. Acridine and related derivatives bind to DNA and RNA due to their abilities to intercalate. Acridine Orange (3,6-dimethylaminoacridine) is a nucleic acid-selective metachromatic stain useful for cell cycle determination.
acridine 
Added: 475 days ago by adamsan Views: 10855 Comments: 0
      (1 ratings)

3D structure of chromosome
1:46
This video shows the packaging of DNA in the nucleus.
3D  struct  of  nuc  chroms 
Added: 656 days ago by benchwork Views: 10539 Comments: 0
      (4 ratings)

Protein synthesis
0:0
all How are proteins synthesized? This interactive animation will help you to understand the process. For more information about protein synthesis: Legend: Process whereby DNA encodes for the production of amino acids and proteins. This process can be divided into two parts: 1. Transcription Before the synthesis of a protein begins, the corresponding RNA molecule is produced by RNA transcription. One strand of the DNA double helix is used as a template by the RNA polymerase to synthesize a messenger RNA (mRNA). This mRNA migrates from the nucleus to the cytoplasm. During this step, mRNA goes through different types of maturation including one called splicing when the non-coding sequences are eliminated. The coding mRNA sequence can be described as a unit of three nucleotides called a codon. 2. Translation The ribosome binds to the mRNA at the start codon (AUG) that is recognized only by the initiator tRNA. The ribosome proceeds to the elongation phase of protein synthesis. During this stage, complexes, composed of an amino acid linked to tRNA, sequentially bind to the appropriate codon in mRNA by forming complementary base pairs with the tRNA anticodon. The ribosome moves from codon to codon along the mRNA. Amino acids are added one by one, translated into polypeptidic sequences dictated by DNA and represented by mRNA. At the end, a release factor binds to the stop codon, terminating translation and releasing the complete polypeptide from the ribosome Text Reff: http://www.accessexcellence.org/RC/VL/GG/protein_synthesis.html
proteinsynthesis 
Added: 646 days ago by tubeman Views: 10496 Comments: 2
     (7 ratings)

Stem Cells Part I
1:27
Stem Cells Stem cells serve as the source of all the other specialized cells in the body, both when it forms during embryogenesis and when it replaces cells that have been lost to aging, injury or disease. These videos are created by RIKEN CDB and they explain the different types of stem cell found in the embryonic body and the adult and illustrate the roles of these "master cells" in development and regeneration. Video REff: http://www.cdb.riken.go.jp I also uploaded other 3 parts. Search " stem cells" on DnaTube and most probably you will find other videos.
stemcell 
Added: 645 days ago by siere Views: 10442 Comments: 2
     (5 ratings)

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